BisQue

Open source bioimage analysis & management platform for very large multi‑modal images.

Deployment • On-PremisesPricing • Freemium, OtherHQ • United StatesFounded • 2007Team • 11-50

Product overview

Key capabilities

  • Data Integration
  • Analytics
  • Collaboration

Designed for

  • Biotech
  • Medical Device
  • Other

Pharma stages

DiscoveryPreclinical

Compliance

Other

Integrations

Custom API

Pricing notes

Free open source distribution

Notable customers

Academic research labs

Sources

https://en.wikipedia.org/wiki/BisQue_(Bioimage_Analysis_and_Management_Platform)

Analyst notes

Supports large academic datasets

Similar platforms

Based on category, deployment, and capabilities overlap.

R&DOn-PremisesAnalytics
Amira / Avizo

3D/4D imaging visualization and processing platform for microscopy, tomography, and more.

Visit website

Secondary focus

Key capabilities

  • Analytics
  • Visualization
  • Collaboration

Built for

BiotechPharma

Pricing

License
HQ • United StatesFounded • 1994Team • 201-500
R&DOn-PremisesAutomation; Data Integration; Analytics
Rabix / Bunny (Seven Bridges)

Open-source CWL runner (Bunny) and tooling from Seven Bridges.

Visit website

Secondary focus

Key capabilities

  • Automation; Data Integration; Analytics

Built for

Pharma; Biotech; CRO; IT

Pricing

Open-source
HQ • United StatesFounded • 2016Team • 1-10
R&DOn-Premises; HybridAutomation; Data Integration; Analytics
Arvados

Open-source platform for managing, processing, and sharing large biomedical data with workflow orchestration.

Visit website

Secondary focus

Key capabilities

  • Automation; Data Integration; Analytics

Built for

Pharma; Biotech; CRO; IT

Pricing

Open-source; Subscription
HQ • United StatesFounded • 2013Team • 11-50
R&DSaaSData Integration; Analytics
AWS HealthOmics

Managed workflows & storage for omics on AWS

Visit website

Secondary focus

Key capabilities

  • Data Integration; Analytics

Built for

Pharma; Biotech; Academic

Pricing

Usage-based
HQ • United StatesFounded • 2006Team • 5000+
R&DSaaSData Integration; Collaboration
Blackfynn/Pennsieve

Platform for managing and sharing scientific datasets (neuroscience roots)

Visit website

Secondary focus

Key capabilities

  • Data Integration; Collaboration

Built for

Academic; Biotech

Pricing

Subscription
HQ • United StatesFounded • 2016Team • 11-50
R&DOn-Premises; HybridAutomation; Data Integration; Analytics
Common Workflow Language (CWL) / cwltool

Open standard for describing workflows; reference runner cwltool.

Visit website

Secondary focus

Key capabilities

  • Automation; Data Integration; Analytics

Built for

Pharma; Biotech; CRO; IT

Pricing

Open-source
HQ • InternationalFounded • 2014Team • 1-10